Install dependencies on CI with docker

To avoid permissions problem installing pycurl

.github/workflows/checks.yml

@@ -29,7 +29,7 @@ jobs:
       with:
         python-version: "3.9"
     - name: Install dependencies
-      run: make bootstrap
+      run: make bootstrap-with-docker
     # - name: Run style checks
     #   run: flake8 .
     # - name: Check imports alphabetized